Hi,
thanks for reporting this. Unfortunately, the R-forge site is lagging
behind in providing builds etc. I'll report to them, since this is
beyond my control. In the meanwhile, see if the following works for
you
source("http://www.braju.com/R/hbLite.R";);
installPackages("http://www.braju.com/R/repos/sfit_0.1.9.zip";);
then verify by running the following in a fresh R installation.
library("sfit");
example("cfit.matrix");
If it works, everything should be fine.
Also, make sure you are running R v2.12.0; that is major release when
it comes to R for Windows 64-bit!
/Henrik
On Wed, Nov 10, 2010 at 1:29 AM, Johan Staaf <johan.st...@med.lu.se> wrote:
> Hi
> I am trying to run CRMAv2 analysis on some Affymetrix SNP chips, using
> 64-bit Windows 7. However, I continuously run into problems with the sfit
> package. I installed the latest aroma.affymetrix package however when
> trying:
>
> accNormal <- AllelicCrosstalkCalibration(csNormal,model="CRMAv2")
> print(accNormal)
> csCNormal <- process(accNormal, verbose=verbose)
>
> the run always end up with sfit package not loaded. However, trying to
> install sfit from R-forge using the specified command from within R ends up
> with saying package not available. ?
>
> Furthermore, reading in the forum I also tried:
>
> install.packages("sfit",repos="http://R-forge.R-project.org";,
> type="win.binary")
>
> but that did not work. I also tried the 32-bit R version (latest) with no
> success.
>
> Is there a way to actually get it to work on Windows?
>
> Best regards
> Johan
>
> --
> When reporting problems on aroma.affymetrix, make sure 1) to run the latest
> version of the package, 2) to report the output of sessionInfo() and
> traceback(), and 3) to post a complete code example.
>
>
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>
--
When reporting problems on aroma.affymetrix, make sure 1) to run the latest
version of the package, 2) to report the output of sessionInfo() and
traceback(), and 3) to post a complete code example.
You received this message because you are subscribed to the Google Groups
"aroma.affymetrix" group with website http://www.aroma-project.org/.
To post to this group, send email to aroma-affymetrix@googlegroups.com
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