Hi guys,
I tried to convert recent customCDF HTHGU133A_Hs_ENTREZG.cdf (version
15.10) to binary format and end up with error message:
Error in convertCdf("HTHGU133A_Hs_ENTREZG.cdf",
"HTHGU133A_Hs_ENTREZG,Binary.cdf", :
An inconsistency between source and destination CDF was detected.
Reason:Units:
Any suggestion?
Thanks,
Ying
> library(affxparser)
> convertCdf("HTHGU133A_Hs_ENTREZG.cdf","HTHGU133A_Hs_ENTREZG,Binary.cdf",
+ version = 4,force = TRUE,verbose=TRUE)
Reading CDF header...
Reading CDF header...done
Reading CDF QC units...
Reading CDF QC units...done
Reading CDF units...
Reading CDF units...done
Writing CDF structure...
Timing for writeCdf():
user system elapsed
10.11 0.02 10.14
Writing CDF structure...done
Comparing CDFs...
Comparing CDFs...
CDF 1: ./HTHGU133A_Hs_ENTREZG.cdf
CDF 2: ./HTHGU133A_Hs_ENTREZG,Binary.cdf
Comparing CDF headers...
Comparing CDF headers...done
Comparing QC units...
Comparing QC units...done
Comparing units...
Error in convertCdf("HTHGU133A_Hs_ENTREZG.cdf",
"HTHGU133A_Hs_ENTREZG,Binary.cdf", :
An inconsistency between source and destination CDF was detected.
Reason:Units:
> sessionInfo()
R version 2.15.0 (2012-03-30)
Platform: x86_64-pc-mingw32/x64 (64-bit)
locale:
[1] LC_COLLATE=English_United States.1252 LC_CTYPE=English_United
States.1252
[3] LC_MONETARY=English_United States.1252
LC_NUMERIC=C
[5] LC_TIME=English_United States.1252
attached base packages:
[1] stats graphics grDevices utils datasets methods base
other attached packages:
[1] affxparser_1.28.0 BiocInstaller_1.4.4
loaded via a namespace (and not attached):
[1] tools_2.15.0
>
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