Hi all, I have custom array (similar to human Exon array) and try to study alternative splicing using FIRMA. i) in theory, I think I can use FIRMA, but wonder that's possible at current aroma.affymetrix setup. ii) if that's possible, what should be a chipType (i.e. can I use any human exon array such as chipType <- "HuEx-1_0-st-v2" ) iii) is there anything else I need to consider in terms of algorithm implementation since this is a custom array?
Thank you so much! Hannah -- When reporting problems on aroma.affymetrix, make sure 1) to run the latest version of the package, 2) to report the output of sessionInfo() and traceback(), and 3) to post a complete code example. You received this message because you are subscribed to the Google Groups "aroma.affymetrix" group with website http://www.aroma-project.org/. To post to this group, send email to aroma-affymetrix@googlegroups.com To unsubscribe and other options, go to http://www.aroma-project.org/forum/
