For a backupPC server you need to remember that the process is disk 
bound, not CPU bound. In my tests, software RAID would be ample for what 
you are wanting to put together, and if you have a controller die it is 
easy to get another one as the RAID configuration isn't dependant on the 
controller. Remember too that a lot of RAID controllers are actually 
software RAID and have a lower performance than the linux / bsd software 
RAID. Here is a link that states a few things to consider hardware RAID 
card vs software RAID on standard controllers: 
http://www.linuxplanet.com/linuxplanet/tutorials/4349/2/

Also remember that since backupPC is disk intensive, you need to split 
the reads across as many disks as you can. I would invest in a number of 
smaller disks and use RAID10 (or RAID1 with LVM combining them). I would 
definitely not use RAID5 as it has serious performance issues when 
compared to RAID1. See http://www.baarf.com/ for details.

I know this next example is not for backupPC but we recently changed our 
database server from a 3-disk 15k rpm SCSI (Compaq SmartArray RAID) with 
dual Xeon 3.2GHz CPU to an 8-disk, 10k rpm SATA (standard non-RAID SATA 
controllers) with a single PentiumD 2.9GHz CPU and saw an impressive 
increase in performance. Our database server, like backupPC was limited 
by disk seeks and having more spindles allowed us to spread the load out.

Hope that helps with your decision.
Josh.

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