Hi,
This one is might odd. Before I send lines and lines of code and stacktraces,
maybe someone has some intuition.
Why would this code
ArrayDesign ad = ArrayDesign.getById(dc, 14);
System.out.println("name = " + ad.getName());
System.out.println("descr = " + ad.getDescription());
System.out.println("hasFeat = " + ad.hasFeatures());
System.out.println("isAffy = " + ad.isAffyChip());
print out the following from commandline testing:
name = Affymetrix Plasmodium Anopheles
descr = Short description
hasFeat = true
isAffy = true
and the following from testing within a tomcat webapp:
name = Affymetrix Plasmodium Anopheles
descr = Short description
hasFeat = false
isAffy = false
Needless to say, the former is correct, and the latter is causing major
headaches.
It seems that the basic attributes (name, description) are being pulled out of
the database OK, but the array-design-specific attributes is not.
Some kind of conflict between hibernate and something in our servlet?
Will gladly send more details, but I'm not exactly sure where to start.
Both are using an identical set of base config files and base jar files:
the commandline version sets the class path to:
/usr/local/base2dev/www/WEB-INF/{lib,classes}
the tomcat webapp has these copied over
(md5/diff says they are identical)
many thanks,
Bob.
--
Bob MacCallum | VectorBase Developer | Kafatos/Christophides Groups |
Division of Cell and Molecular Biology | Imperial College London |
Phone +442075941945 | Email [EMAIL PROTECTED]
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