Ahh if I do the same thing with a tif image I get :

Error [[B cannot be cast to [[S ???

Can that be explained ?

Jan

-----Original Message-----
From: [EMAIL PROTECTED]
[mailto:[EMAIL PROTECTED] On Behalf Of Nicklas
Nordborg
Sent: Wednesday, August 20, 2008 11:31 AM
To: BASE ML
Subject: Re: [base] Bad endianness tag (not 0x4949 or 0x4d4d) when
generating spot images

Jan Torleif Pedersen wrote:
> Greetings,
> 
> New problem from my end.... I am attempting to generate spot images
from 
> my Agilent data. Import of raw data works fine and I can run 'Create 
> Spot images', I only have one channel data (green Cy3 data). Anyhow I 
> define all the scaling and offsets as defined in the outputfile from 
> Aglilent feature extraction software and the spot image plugin runs 
> for a couple of minutes and then it barfs out with the message:
> 
> Bad endianness tag (not 0x4949 or 0x4d4d
> 
> My image files are jpeg, jfif standard 1.01.

The spot image extractor expects TIFF images.

/Nicklas


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