Hi, We are currently working on how to incorporate sequence data in BASE. We now have in-house sequencing capacity and need to manage all data generated. We have not formalized our ideas yet but we'll post whatever we will are planning to do in another mail/ticket in very near future. We welcome all ideas and feedback.
Many improvements on BASE (such as file only raw data storage, file storage on external file servers) have been made during the last few months to accommodate seqdata. Jari On 2010-10-08 20.06, Adam Halstead wrote: > I read with interest Bob MacCallum's post from Oct 2008: > http://www.mail-archive.com/basedb-users@lists.sourceforge.net/msg01559.html > > Our group is looking into solutions with which to build a local data > warehouse including the capability to store next-gen sequencing data > (RNA-Seq, *ChIP*-*Seq*) > and BASE looks to meet many of our other requirements. > > I also found that a ticket had been created (Ticket #1153 (new enhancement)) > for the 2.x+ milestones. > Any updates on this one? > > Thanks, > Adam > Programmer Analyst : Great Lakes Bioenergy Research Center : University of > Wisconsin Madison > > > > > ------------------------------------------------------------------------------ > Beautiful is writing same markup. Internet Explorer 9 supports > standards for HTML5, CSS3, SVG 1.1, ECMAScript5, and DOM L2& L3. > Spend less time writing and rewriting code and more time creating great > experiences on the web. Be a part of the beta today. > http://p.sf.net/sfu/beautyoftheweb > > > > _______________________________________________ > The BASE general discussion mailing list > basedb-users@lists.sourceforge.net > unsubscribe: send a mail with subject "unsubscribe" to > basedb-users-requ...@lists.sourceforge.net ------------------------------------------------------------------------------ Beautiful is writing same markup. Internet Explorer 9 supports standards for HTML5, CSS3, SVG 1.1, ECMAScript5, and DOM L2 & L3. Spend less time writing and rewriting code and more time creating great experiences on the web. Be a part of the beta today. http://p.sf.net/sfu/beautyoftheweb _______________________________________________ The BASE general discussion mailing list basedb-users@lists.sourceforge.net unsubscribe: send a mail with subject "unsubscribe" to basedb-users-requ...@lists.sourceforge.net
