You can also try CDHit-est.
Paulo
Martin Gollery wrote:
There are many programs for clustering ESTs or other nucleic
sequences. Try blastclust, D2 or Cap3 for starters.
Martin Gollery
On Wed, Dec 3, 2008 at 1:18 AM, T Joshi <[EMAIL PROTECTED]> wrote:
Hi,
I would like to know if there are any tools/software for clustering
DNA sequences. I searched for them, but mostly I ended up with those
which work on protein sequences. If there is any bioconductor package
which also could work with sequence data, it would be good to know.
Thanks
Josh
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