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BI101 Introduction to DNA and Protein Sequence Analysis
June 25-29, 2012
Live, Online at Bioinformatics.Org
http://www.bioinformatics.org/wiki/BI101
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OBJECTIVES:
This course teaches the individual how to analyze DNA and protein sequences
using computer software. Topics to be covered include description of sequence
alignments, search, formats, and various command line tools such as BLAST,
FASTA, HMMER and editing software such as Geneious, Jalview, etc.
INSTRUCTOR:
Shailender Nagpal
SYLLABUS:
The course is divided into 4 sessions, roughly 1-1.5 hours each. Homework
assignments will involve running computationally intensive tools.
Session 1: Fundamentals of DNA and protein alphabets, representations,
patterns, structures and annotations
Session 2: DNA and protein sequence alignments: local, global and multiple;
demonstration of tools to perform these alignments
Session 3: Sequence database searches using BLAST, FASTA and SSEARCH
Session 4: Additional DNA sequence analysis applications, such as gene finding,
genome annotation and assembly
Lecture schedule: Monday through Thursday, 16:00-17:30 GMT
REGISTRATION:
http://www.bioinformatics.org/edu/ACTG
FOR MORE INFORMATION:
http://www.bioinformatics.org/wiki/BI101_Introduction_to_DNA_and_Protein_Sequence_Analysis
Or contact: e...@bioinformatics.org
Cheers,
Jeff
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J.W. Bizzaro
Bioinformatics Organization, Inc. (Bioinformatics.Org)
E-mail: j...@bioinformatics.org
Phone: +1 978 621 8258
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