I got an overlay working:
beaglebone:~/boneDeviceTree-master/overlay$ cat hd44780.dts
/*
* Copyright (C) 2012 Texas Instruments Incorporated - http://www.ti.com/
*
* This program is free software; you can redistribute it and/or modify
* it under the terms of the GNU General Purpose License Version 2 as
* published by the Free Software Foundation
*
* Original from: 
github.com/jadonk/validation-scripts/blob/master/test-capemgr/
*
* Modified by Derek Molloy for the example on www.derekmolloy.ie
* that maps GPIO pins for the example
*/

/dts-v1/;
/plugin/;

/{
       compatible = "ti,beaglebone", "ti,beaglebone-black";
       part-number = "hd44780";
       version = "00A0";

       fragment@0 {
             target = <&am33xx_pinmux>;

             __overlay__ {
                  pinctrl_hd44780: hd44780_pins {
                        pinctrl-single,pins = <
                                        0x038 0x17
                                        0x03c 0x17
                                        0x028 0x17
                                        0x024 0x17
                                        0x030 0x17
                                        0x034 0x17
                        >;
                  };
             };
       };

       fragment@1 {
                target = <&ocp>;
                __overlay__ {
                        test_helper: helper {
                                compatible = "bone-pinmux-helper";
                                pinctrl-names = "default";
                                pinctrl-0 = <&pinctrl_hd44780>;
                                status = "okay";
                        };
                };
        };
};

Hasn't solved my problem with the LCD code, however.

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