Hello Chris and list
Chris Samuel wrote:
----- "Gus Correa" <[EMAIL PROTECTED]> wrote:
One reason not mentioned is serial programs.
Well a cluster is to run parallel jobs.
Hmm, a cluster is to run HPC codes, there are plenty of
legitimate single CPU codes to solve embarrassingly
parallel problems! :-)
We seem to agree on this.
An example:
Millions of cross correlations of micro-earthquake seismograms (time
series),
to locate the focii precisely, and produce a high-resolution map of
geologic faults and potential hazard
in California took several days using shared nodes.
The code is serial, the size of each calculation doesn't justify
parallelism,
but the large number of them requires massive computational resources.
I wouldn't bother the people who wrote the program to parallelize it (in
the sense of using MPI or OpenMP).
The script that launched the tons of serial jobs was the "embarrassingly
parallel" component of it.
Some people would say it is a waste to run this type of program on a
cluster with Myrinet.
If we had a a farm of serial computers we would have used it, but we
don't have one.
[...]
and an average of about 75% use of its maximum capacity
[..]
I couldn't find usage data of other public, academic, or industry
machines to compare.
It appears we've averaged almost 77% utilisation
since the beginning of 2004 (when our current usage
system records begin).
Thank you very much for the data point!
I've insisted here that above 70% utilization is very good,
given the random nature of demand and jobs on queues in the academia, etc.
However, some folks would want more than 90% efficiency to get happy.
I had to resort to the Second Law of Thermodynamics,
compare our efficiency with Carnot cycles,
with the efficiency of thermal engines, of biological systems,
of the atmosphere and ocean heat transport, etc, to make my point,
and the theoretical argument almost jeopardized my job ... :)
cheers,
Chris
Cheers,
Gus Correa
--
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Gustavo J. Ponce Correa, PhD - Email: [EMAIL PROTECTED]
Lamont-Doherty Earth Observatory - Columbia University
P.O. Box 1000 [61 Route 9W] - Palisades, NY, 10964-8000 - USA
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