Hi guys, This is the problem of mapping back and forth between coordinate spaces, such as between genomic and transcript space. I think there was some progress this release cycle (introduction of mapCoords generic, etc), but I think there is yet more to do. For example, transcriptLocs2RefLocs could be given a ranges-based wrapper that conforms to the mapCoords API somehow. Could we please put this on the TODO list of someone (in Seattle) for the next release cycle?
Michael [[alternative HTML version deleted]] _______________________________________________ Bioc-devel@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/bioc-devel