Hi Henrik,
FWIW there is some additional information here:
https://stat.ethz.ch/pipermail/bioc-devel/2014-January/005156.html
In particular the section starting at "One important difference with
the svn software repository" provides some useful hints on how to
commit changes to the data (see step 4.).
H.
On 10/23/2014 07:46 PM, Dan Tenenbaum wrote:
----- Original Message -----
From: "Vincent Carey" <st...@channing.harvard.edu>
To: "Henrik Bengtsson" <h...@biostat.ucsf.edu>
Cc: "bioC-devel" <bioc-de...@stat.math.ethz.ch>
Sent: Thursday, October 23, 2014 7:45:13 PM
Subject: Re: [Bioc-devel] Documentation on how to update a BioC experimental
package?
There is a README.txt in the pkgs folder.
I will attach it. I think this is accurate, but there may be
something
else on the site.
See the Experiment Data Packages section of
http://www.bioconductor.org/developers/how-to/source-control/
Dan
On Thu, Oct 23, 2014 at 10:23 PM, Henrik Bengtsson
<h...@biostat.ucsf.edu>
wrote:
It's been a while since I worked with experimental packages. Where
can I find documentation on how to (Subversion) update our
AffymetrixDataTestFiles package with additional data files? All I
know is that the SVN repository only contains a stub of the package
and
http://www.bioconductor.org/developers/package-guidelines/#package-types
provides little information and basically only point to the devel
mailing list.
Thanks,
Henrik
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Program in Computational Biology
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