Dear Martin, Thanks for your quick reply. The typo has been fixed and the pdf file is removed.
Best Regards, Guangchuang On Tue, Feb 10, 2015 at 8:13 PM, Martin Morgan <mtmor...@fredhutch.org> wrote: > On 02/10/2015 01:51 AM, Guangchuang Yu wrote: > >> Dear all, >> >> I found the vignette of my package DOSE is missing, >> http://bioconductor.org/packages/devel/bioc/html/DOSE.html. >> >> I am pretty sure the I don't have .Rbuildignore file and the vignette, >> DOSE.Rnw, passing the build with knit2pdf. >> >> Not only it is missing in the bioconductor website, but also missing after >> R CMD build in my computer. >> >> Does anyone have any idea? >> > > Hi Guangchuang -- > > If I do > > DOSE/vignettes$ R CMD Sweave DOSE.Rnw > Bioconductor version 3.1 (BiocInstaller 1.17.5), ?biocLite for help > Error: Vignette engine package not specified > Execution halted > > Hmm.... I think in your LaTeX document you need '::' rather than ':' in > > % \VignetteEngine{knitr::knitr} > > Also, the DOSE.pdf should be removed from the vignette/ directory (it gets > built!). > > Martin > > >> >> Best Regards, >> Guangchuang Yu >> >> [[alternative HTML version deleted]] >> >> _______________________________________________ >> Bioc-devel@r-project.org mailing list >> https://stat.ethz.ch/mailman/listinfo/bioc-devel >> >> > > -- > Computational Biology / Fred Hutchinson Cancer Research Center > 1100 Fairview Ave. N. > PO Box 19024 Seattle, WA 98109 > > Location: Arnold Building M1 B861 > Phone: (206) 667-2793 > [[alternative HTML version deleted]] _______________________________________________ Bioc-devel@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/bioc-devel