Dear Dr.Pages, I've been trying to build a BSgenome for Bos_taurus_UMD3.1.1 from NCBI <http://www.ncbi.nlm.nih.gov/assembly/GCF_000003055.6/>. But I'm getting the same error message...
>library(BSgenome) > forgeBSgenomeDataPkg("/PATH/TO/genome.fa") Error: Line starting '>1 ...' is malformed! I don't have much knowledge of R, so creating a custom BSgenome seems out of my league. I would like to kindly request the bovine BSgenome package. Thank you! *Byungkuk Min* Ph.D Candidate University of Science & Technology, <http://ust.ac.kr> Korea Research Institute of Bioscience and Biotechnology <http://www.kribb.re.kr> 125 Gwahangno, Yuseong-Gu, Daejeon, Korea (305-806) Laboratory : 042-860-4423 FAX : 042-860-4608 Cell phone : 010-5209-7377 [[alternative HTML version deleted]] _______________________________________________ Bioc-devel@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/bioc-devel