Hi all,
I'm running the latest Bioc + PANTHER.db
I think we've got the GOSLIM_TERM where the GOSLIM_ID should be:
In the vignette, we have this:
R> go_ids <- head(keys(PANTHER.db,keytype="GOSLIM_ID"))
R> go_ids
## [1] "GO:0000003" "GO:0000165" "GO:0000166" "GO:0000228"
"GO:0000375" "GO:0000398"
But what we really get is:
R> head(keys(PANTHER.db,keytype="GOSLIM_ID"))
[1] "2-arachidonoylglycerol biosynthesis"
[2] "5-Hydroxytryptamine biosynthesis"
[3] "5-Hydroxytryptamine degredation"
[4] "5HT1 type receptor mediated signaling pathway"
R> packageVersion('PANTHER.db')
[1] '1.0.2'
Thanks,
-steve
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