Thanks, we’ve already read that. I was more hoping for a response from the Bioconductor team Glyn
From: Kasper Daniel Hansen [mailto:kasperdanielhan...@gmail.com] Sent: 16 March 2016 13:20 To: Glyn Bradley Cc: bioc-devel@r-project.org Subject: Re: [Bioc-devel] Issues uploading our updated package (CausalR) I don't know much about deprecated packages and how to deal with them, but for your svn questions, start by reading the howto: https://www.bioconductor.org/developers/source-control/ Kasper On Wed, Mar 16, 2016 at 6:19 AM, Glyn Bradley <glyn.x.brad...@gsk.com<mailto:glyn.x.brad...@gsk.com>> wrote: Hi All, Our package, CausalR, broke when igraph was updated last year. We have now fixed this, but are having problems uploading the new version. The package had become depreciated in devel, but there's still a landing page in release. We checked out the existing Bioconductor version (via SVN) to a local directory from https://hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/CausalR The new, fixed, version was uploaded via SVN commit [Revision: 114806*] back to https://hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/CausalR But if you open https://hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/CausalR in a web browser it's still showing old data from Revision: 114827 (we don't understand why our new upload had a revision number lower than this) Also, because CausalR had become depreciated in devel, we were previously told we would have to update the package in both the devel and release trunks, but we only have the one url (https://hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/CausalR) So separately to the issues above about our update not seeming to stay on the system, could someone please advise how we update both trunks? Many thanks. Feel free to email me directly if this isn't a suitable discussion for the mailing list. Glyn ________________________________ This e-mail was sent by GlaxoSmithKline Services Unlimited (registered in England and Wales No. 1047315), which is a member of the GlaxoSmithKline group of companies. The registered address of GlaxoSmithKline Services Unlimited is 980 Great West Road, Brentford, Middlesex TW8 9GS. [[alternative HTML version deleted]] _______________________________________________ Bioc-devel@r-project.org<mailto:Bioc-devel@r-project.org> mailing list https://stat.ethz.ch/mailman/listinfo/bioc-devel ________________________________ This e-mail was sent by GlaxoSmithKline Services Unlimited (registered in England and Wales No. 1047315), which is a member of the GlaxoSmithKline group of companies. The registered address of GlaxoSmithKline Services Unlimited is 980 Great West Road, Brentford, Middlesex TW8 9GS. [[alternative HTML version deleted]] _______________________________________________ Bioc-devel@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/bioc-devel
