Hi Aaron, Sorry for that. This should be fixed in SummarizedExperiment 1.1.24.
Cheers, H. On 04/09/2016 03:56 AM, Aaron Lun wrote:
Dear List, Martin; It looks like rbind'ing fails when the first argument is a SummarizedExperiment with no rows: library(SummarizedExperiment) example(SummarizedExperiment, echo=FALSE) rbind(se, se[0,]) # works okay; returns 'se'. rbind(se[0,], se) # fails # Error in rep.int(width, k) : invalid 'times' value It might be a fairly silly example, but I would have expected it to just give back 'se'. Cheers, Aaron Here's my session information: R version 3.3.0 beta (2016-04-08 r70447) Platform: x86_64-pc-linux-gnu (64-bit) Running under: Ubuntu 14.04.4 LTS locale: [1] LC_CTYPE=en_GB.UTF-8 LC_NUMERIC=C [3] LC_TIME=en_GB.UTF-8 LC_COLLATE=en_GB.UTF-8 [5] LC_MONETARY=en_GB.UTF-8 LC_MESSAGES=en_GB.UTF-8 [7] LC_PAPER=en_GB.UTF-8 LC_NAME=C [9] LC_ADDRESS=C LC_TELEPHONE=C [11] LC_MEASUREMENT=en_GB.UTF-8 LC_IDENTIFICATION=C attached base packages: [1] stats4 parallel stats graphics grDevices utils datasets [8] methods base other attached packages: [1] SummarizedExperiment_1.1.23 Biobase_2.31.3 [3] GenomicRanges_1.23.25 GenomeInfoDb_1.7.6 [5] IRanges_2.5.42 S4Vectors_0.9.46 [7] BiocGenerics_0.17.4 loaded via a namespace (and not attached): [1] zlibbioc_1.17.1 tools_3.3.0 XVector_0.11.8 _______________________________________________ Bioc-devel@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/bioc-devel
-- Hervé Pagès Program in Computational Biology Division of Public Health Sciences Fred Hutchinson Cancer Research Center 1100 Fairview Ave. N, M1-B514 P.O. Box 19024 Seattle, WA 98109-1024 E-mail: hpa...@fredhutch.org Phone: (206) 667-5791 Fax: (206) 667-1319 _______________________________________________ Bioc-devel@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/bioc-devel