Hi Ioannis, Vincent, I'm in the middle of debugging a similar situation myself, which may provide a reproducible example at a package level.
I am in the process of setting up AppVeyor CI for my package, and my R CMD check fails because of the same error. https://ci.appveyor.com/project/kevinrue/tvtb/build/1.0.11 To debug the issue, I am also currently updating my local installation to the latest devel packages (until biocValid() returns TRUE). Once that is done, I may be able to provide a more practical minimal working example for the issue (i.e. the code in one of my man pages). Best, Kevin On Thu, Oct 27, 2016 at 12:23 PM, Vincent Carey <st...@channing.harvard.edu> wrote: > Please send a reproducible example with value of sessionInfo() at time of > error. > > On Thu, Oct 27, 2016 at 7:06 AM, Ioannis Vardaxis < > ioannis.varda...@math.ntnu.no> wrote: > > > Hi, > > > > I am using the R-devel version for writing an R package. I tried to use > > the c(Granges,Granges) command to merge two Granges objects and I get the > > following error: > > > > Error in .Primitive("c")(<S4 object of class "Rle">, <S4 object of class > > "Rle">) : > > could not find symbol "recursive" in environment of the generic > function > > > > I also get the same error when I use InteractionSet::GInteractions( > Granges, > > Granges). > > > > I downloaded IRanges, GenomicRanges and InteractionSet packages from the > > source. > > > > How can I solve this error? > > > > Best, > > Ioannis > > -- > > Ioannis Vardaxis > > Stipendiat IMF > > NTNU > > > > [[alternative HTML version deleted]] > > > > _______________________________________________ > > Bioc-devel@r-project.org mailing list > > https://stat.ethz.ch/mailman/listinfo/bioc-devel > > > > [[alternative HTML version deleted]] > > _______________________________________________ > Bioc-devel@r-project.org mailing list > https://stat.ethz.ch/mailman/listinfo/bioc-devel > [[alternative HTML version deleted]] _______________________________________________ Bioc-devel@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/bioc-devel