Dear BiocDevel: I ran into the issue after installed devel version of R and Bioc 3.4. Because my packages depends on some packages from CRAN repository, now I failed to installed paclages from CRAN. I don't have problem when I used released version of R. Because new packages must coordinate with devel version of Bioc and R, so I did it. But can't installl packages from CRAN like dplyr. How can I overcome this issue ? Any quick solution ? I got error as follow:
> BiocInstaller::useDevel() Error: 'devel' version already in use > install.packages("dplyr") Error in install.packages : missing value where TRUE/FALSE needed > > sessionInfo() R Under development (unstable) (2016-11-09 r71642) Platform: x86_64-w64-mingw32/x64 (64-bit) Running under: Windows >= 8 x64 (build 9200) locale: [1] LC_COLLATE=English_United States.1252 [2] LC_CTYPE=English_United States.1252 [3] LC_MONETARY=English_United States.1252 [4] LC_NUMERIC=C [5] LC_TIME=English_United States.1252 attached base packages: [1] parallel stats4 stats graphics grDevices [6] utils datasets methods base other attached packages: [1] SummarizedExperiment_1.5.2 Biobase_2.35.0 [3] XVector_0.15.0 rtracklayer_1.35.1 [5] GenomicRanges_1.27.5 GenomeInfoDb_1.11.3 [7] IRanges_2.9.7 S4Vectors_0.13.2 [9] BiocGenerics_0.21.0 BiocInstaller_1.25.2 loaded via a namespace (and not attached): [1] lattice_0.20-34 XML_3.98-1.5 [3] Rsamtools_1.27.2 Biostrings_2.43.0 [5] GenomicAlignments_1.11.0 bitops_1.0-6 [7] grid_3.4.0 zlibbioc_1.21.0 [9] Matrix_1.2-7.1 BiocParallel_1.9.1 [11] tools_3.4.0 RCurl_1.95-4.8 [13] compiler_3.4.0 > -- Jurat Shahidin Dipartimento di Elettronica, Informazione e Bioingegneria Politecnico di Milano Piazza Leonardo da Vinci 32 - 20133 Milano, Italy Mobile : +39 3279366608 [[alternative HTML version deleted]] _______________________________________________ Bioc-devel@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/bioc-devel