On 03/27/2017 12:22 PM, Aimin Yan wrote:
I am submitting a R package to bioconductor. but I got time out errors when
I performed R CMD check.
Is there a possible way that I can set up time to allow more time for R CMD
check? Or I have to use examples that they do not cost large time.
Submitted packages need to conform to package guidelines for space and time
http://bioconductor.org/developers/package-guidelines/#correctness
so you'll need to develop realistic examples requiring modest resources.
Often long-running examples result from inefficient code, so it is
worth-while to profile your code to discover where the most time is
spent, and seek efficient implementations for that section of code
either through better use of vectorization or more sophisticated algorithms.
Martin
Thank you for your help
Aimin
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