Hi, What is the email you submitted with? So that I can check your submission.
Nitesh > On Oct 10, 2017, at 3:57 PM, Van Twisk, Daniel > <daniel.vantw...@roswellpark.org> wrote: > > > > > ________________________________ > From: Vladislav Petyuk <pet...@gmail.com> > Sent: Tuesday, October 10, 2017 2:56 PM > To: Van Twisk, Daniel > Subject: EXTERNAL: Re: MSnID failing on release and devel > > > I submitted my SSH RSA key back on Friday evening. > > made sure that I have upstream in .git/config > > [remote "upstream"] > > url = g...@git.bioconductor.org:packages/MSnID.git > > fetch = +refs/heads/*:refs/remotes/upstream/* > > > But still can't fetch "upstream". What am I missing (if anything)? > > > WE33801:MSnID d3m629$ git fetch --all > > Fetching origin > > Fetching upstream > > Permission denied (publickey). > > fatal: Could not read from remote repository. > > > Please make sure you have the correct access rights > > and the repository exists. > > error: Could not fetch upstream > > WE33801:MSnID d3m629$ > > On Fri, Oct 6, 2017 at 7:15 AM Van Twisk, Daniel > <daniel.vantw...@roswellpark.org<mailto:daniel.vantw...@roswellpark.org>> > wrote: > > MSnID is a package that has been on Biocondcutor for three years, so there is > no reason to set up a webhook as described in the "adding-a-web-hook" section > in contributions. The Bioconductor Mirror that you referred to > (https://github.com/Bioconductor-mirror/MSnID) is deprecated and will no > longer reflect further changes to your package. I can see that you've > recently made new commits to your package on your github repository. To push > the changes on the Bioconductor git server, you must first complete this > Google form, if you have not already done so, so that you can have write > access to your package on the BIoconductor git server > (https://docs.google.com/forms/d/e/1FAIpQLSdYJ86-qpStdbbcPzFFXO4_XWnN8DvF2dOgNLE_iWNd0J-g8g/viewform). > Once this is done, you need to follow the instructions at this link to sync > your existing git repository to the server's > https://master.bioconductor.org/developers/how-to/git/sync-existing-repositories/. > > [https://lh4.googleusercontent.com/aw68Dl1RAj_x7Ub4askJuRpQYDopphhllaweY9qUhJUjm2rblsz_BOrqXW1Zk_lQUcA=w1200-h630-p]<https://docs.google.com/forms/d/e/1FAIpQLSdYJ86-qpStdbbcPzFFXO4_XWnN8DvF2dOgNLE_iWNd0J-g8g/viewform> > > Bioconductor SSH > keys<https://docs.google.com/forms/d/e/1FAIpQLSdYJ86-qpStdbbcPzFFXO4_XWnN8DvF2dOgNLE_iWNd0J-g8g/viewform> > docs.google.com<http://docs.google.com> > This form allows Bioconductor developers to submit SSH keys for access to > their Bioconductor git repository. > > > > ________________________________ > From: Vladislav Petyuk <pet...@gmail.com<mailto:pet...@gmail.com>> > Sent: Friday, October 6, 2017 2:56:05 AM > To: Van Twisk, Daniel > Subject: Re: MSnID failing on release and devel > > Daniel, could you help to sort out the following problem? > I created webhook as described here > https://github.com/Bioconductor/Contributions#adding-a-web-hook > However, the test delivery didn't do through. > https://github.com/vladpetyuk/MSnID/settings/hooks/16670279#delivery-response > It says "400 Bad Request" > > I'd appreciated any pointers, > Vlad > > On Thu, Oct 5, 2017 at 12:59 PM Vladislav Petyuk > <pet...@gmail.com<mailto:pet...@gmail.com>> wrote: > I believe before it was set though webhook. Now it is a bit different. I'll > try to sort it out > http://master.bioconductor.org/developers/how-to/git/maintain-github-bioc/ > > On Thu, Oct 5, 2017 at 12:45 PM Vladislav Petyuk > <pet...@gmail.com<mailto:pet...@gmail.com>> wrote: > The problem is fixed. > I apologize if I lost track how Bioconductor packages are updated. It used > to be that once the commit pushed to GitHub it is propagated to > Bioconductor's GitHub. > The code is updated on my account, but not on Bioconductors (after 30 min > wait time). > https://github.com/vladpetyuk/MSnID > https://github.com/Bioconductor-mirror/MSnID > Please suggest how to make sure the code fix gets into Bioconductor repo. > Thanks, > Vlad > > > On Fri, Sep 29, 2017 at 1:05 PM Vladislav Petyuk > <pet...@gmail.com<mailto:pet...@gmail.com>> wrote: > Will try. Thanks for bringing this to my attention, Vlad > > On Fri, Sep 29, 2017 at 1:01 PM Van Twisk, Daniel > <daniel.vantw...@roswellpark.org<mailto:daniel.vantw...@roswellpark.org>> > wrote: > > Hello, > > > I am a member of the Bioconductor core team and am emailing you to notify you > that a package you are maintaining, MSnID, is failing on our release and > devel single package builders: > https://www.bioconductor.org/checkResults/release/bioc-LATEST/MSnID/veracruz2-buildsrc.html > & > https://www.bioconductor.org/checkResults/devel/bioc-LATEST/MSnID/veracruz1-buildsrc.html. > Version 3.6 of Bioconductor is coming soon and we would like the release to > be free of errors. In addition, If your package is failing on the release > branch, these failures will be cemented into version 3.5 of Bioconductor. > For these reasons, we ask you make the fixes to your package by mid-October. > If you have any question, please don't hesitate to reply. > > > Thank you. > > > This email message may contain legally privileged and/or confidential > information. If you are not the intended recipient(s), or the employee or > agent responsible for the delivery of this message to the intended > recipient(s), you are hereby notified that any disclosure, copying, > distribution, or use of this email message is prohibited. If you have > received this message in error, please notify the sender immediately by > e-mail and delete this email message from your computer. Thank you. > > This email message may contain legally privileged and/or confidential > information. If you are not the intended recipient(s), or the employee or > agent responsible for the delivery of this message to the intended > recipient(s), you are hereby notified that any disclosure, copying, > distribution, or use of this email message is prohibited. If you have > received this message in error, please notify the sender immediately by > e-mail and delete this email message from your computer. Thank you. > > > This email message may contain legally privileged and/or confidential > information. If you are not the intended recipient(s), or the employee or > agent responsible for the delivery of this message to the intended > recipient(s), you are hereby notified that any disclosure, copying, > distribution, or use of this email message is prohibited. If you have > received this message in error, please notify the sender immediately by > e-mail and delete this email message from your computer. 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