Thanks, Martin! Cheers, Ruqian
On Sun, Apr 15, 2018 at 9:06 PM, Martin Morgan < martin.mor...@roswellpark.org> wrote: > The solution is, in the NAMESPACE, to import only those functions used > > importFrom(SummarizedExperiment, "start", "end") > importFrom(stats, "mean") > > or to import everything but > > importFrom(stats, except = c(start, end)) > > or to explicitly resolve symbols in the code and not mention them in the > NAMESPACE file. > > SummarizedExperiment::start(...) > > Each of these styles is supported by roxygen2. > > Martin > > > > On 04/14/2018 08:37 PM, Ruqian Lyu wrote: > >> Hi guys, >> >> I have identified the problem. >> It's the packages I imported have same function name, so the previous >> functions get overwritten. >> >> >> Thanks >> >> >> Ruqian >> >> On Sun, Apr 15, 2018 at 10:18 AM, Ruqian Lyu < >> ruqi...@student.unimelb.edu.au >> >>> wrote: >>> >> >> Hi guys, >>> >>> I'm wondering if any of you have met this warning message : >>> >>> Warning: replacing previous import 'SummarizedExperiment::start' by >>> 'stats::start' when loading 'singscore' >>> Warning: replacing previous import 'SummarizedExperiment::end' by >>> 'stats::end' when loading 'singscore' >>> >>> I have import SummarizedExperiment in my DESCRIPTION and NAMESPACE. >>> The package passed R CMD Check and BiocCheck without warnings. But the >>> build report returned the warnings above. >>> >>> Link to the report: >>> >>> http://bioconductor.org/spb_reports/singscore_buildreport_ >>> 20180414041637.html >>> >>> >>> I'm not sure why this is happening. >>> Any help will be appreciated. >>> >>> Thanks! >>> >>> Regards, >>> Ruqian >>> >>> >>> >> [[alternative HTML version deleted]] >> >> _______________________________________________ >> Bioc-devel@r-project.org mailing list >> https://stat.ethz.ch/mailman/listinfo/bioc-devel >> >> > > This email message may contain legally privileged and/or confidential > information. If you are not the intended recipient(s), or the employee or > agent responsible for the delivery of this message to the intended > recipient(s), you are hereby notified that any disclosure, copying, > distribution, or use of this email message is prohibited. If you have > received this message in error, please notify the sender immediately by > e-mail and delete this email message from your computer. Thank you. > [[alternative HTML version deleted]] _______________________________________________ Bioc-devel@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/bioc-devel