Carmen, What is the name of your package?
Valerie On 04/16/2018 11:42 AM, Carmen M. Livi wrote: Hi all, my package recently got accepted and moved to the Bioconductor repository. Suddenly I get an error during the package build for Linux and OS (the INSTALL is working). The error occurs during the creation of the vignette in a chunk. The error was not there before and I can't reproduce it on my local machine: " Error in serialize(data, node$con, xdr = FALSE) : error writing to connection Execution halted " Interestingly I get the same error in totally different points for Linux and OS. I am using BiocParallel with BPPARAM = BiocParallel::MulticoreParam(workers = 5) and requested 5 CPUs. Can it be that I am not supposed to use that many CPUs? Did anyone encounter a similar issue? Should I avoid parallelization in the vignette or should I just reduce the number? The dataset I use in the vignette is a small one, so I suppose it is not a memory issue. Thanks for any suggestion, Carmen _______________________________________________ Bioc-devel@r-project.org<mailto:Bioc-devel@r-project.org> mailing list https://stat.ethz.ch/mailman/listinfo/bioc-devel This email message may contain legally privileged and/or confidential information. If you are not the intended recipient(s), or the employee or agent responsible for the delivery of this message to the intended recipient(s), you are hereby notified that any disclosure, copying, distribution, or use of this email message is prohibited. If you have received this message in error, please notify the sender immediately by e-mail and delete this email message from your computer. Thank you. [[alternative HTML version deleted]] _______________________________________________ Bioc-devel@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/bioc-devel
