Hello Core team and Maintainers,
We have just launched a new feature to regulate packages on
git.bioconductor.org. The feature gives the core team, the ability to easily
“disable" hooks for each package (software, data-experiment, and workflow) as
needed.
The hooks should be modified using a config file called “hooks.conf” which is
available inside the “hook_maintainer.git” repository inside
git.bioconductor.org/admin. With the file, “hooks.conf" you can individually
modify which hooks are disabled for each package.
The “hooks.conf" assumes that THREE pre-receive hooks are applied to each
software package
1. pre-receive-hook-large-files : prevents large files > 5MB
2. pre-receive-hook-duplicate-commits: prevents duplicate commits
3. pre-receive-hook-version-numbers: prevents bad version numbers.
The "hooks.conf" assumes that TWO pre-receive hooks are applied to each
data-experiment and workflow package
1. pre-receive-hook-duplicate-commits: prevents duplicate commits
2. pre-receive-hook-version-numbers: prevents bad version numbers.
With “hooks.conf", you can disable a single or multiple hooks per package as
needed by adding,
Package: <name of package>
pre-receive-hook-large-files: False
pre-receive-hook-duplicate-commits: False
pre-receive-hook-version-numbers: False
Core team members sometimes disable the hooks only for one commit to give
special permission for a package, then it is important to note that the line in
“hooks.conf" which disables the hook for the package, has to be removed.
For maintainers,
If your package needs permission to disable a hook, clearly explain why the
hook needs to be disabled. This is an extreme step, and you package should
almost always fall under the regulations of these hooks. It is always better to
discuss the issue on bioc-devel before trying to disable a hook.
If you have any questions about this new feature, please let me know.
Best,
Nitesh Turaga
Bioconductor Core Team
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