Hi Leo, This is done in GenomicFeatures 1.35.4:
https://github.com/Bioconductor/GenomicFeatures/commit/0b596c18b69f55d097aff0c6cdbbfc0b2993c4aa Cheers, H. On 11/15/18 09:25, Leonardo Collado Torres wrote: > Hi Hervé, > > Looking into the details of GenomicFeatures::exonicParts() I see that > this function runs GenomicFeatures:::.tidy_exons(). Would it be > possible to export this function? Looks like it'll be useful for some > work we are doing. > > We can start using it without the function being exported, and well, > if you prefer not to export it we could still use it in other packages > (though a NOTE will show up in R CMD check). > > I don't think that we'll use GenomicFeatures:::.tidy_transcripts() > directly although GenomicFeatures:::.tidy_exons() runs it. But well, > maybe other users might be interested in your tidy set of functions. > > Best, > Leo -- Hervé Pagès Program in Computational Biology Division of Public Health Sciences Fred Hutchinson Cancer Research Center 1100 Fairview Ave. N, M1-B514 P.O. Box 19024 Seattle, WA 98109-1024 E-mail: hpa...@fredhutch.org Phone: (206) 667-5791 Fax: (206) 667-1319 _______________________________________________ Bioc-devel@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/bioc-devel