On Sep 12, 2019, at 4:28 PM, Pages, Herve <hpa...@fredhutch.org> wrote: > > However things seem to work as expected on the Linux builders: > > library(igvR) > igv <- igvR() > # attempting to open websocket connection on port 15000 > # BrowserViz websocket ready after 1.20 seconds > ping(igv) > # [1] "pong"
Very promising - thanks, Herve. I just tried this on one of my own ubuntu machines. I see that no web browsers are yet installed. Do you know which one is installed on the bioc Linux builders? Is one of them headless? > igv <- igvR() attempting to open websocket connection on port 15000 /usr/bin/xdg-open: 778: /usr/bin/xdg-open: x-www-browser: not found /usr/bin/xdg-open: 778: /usr/bin/xdg-open: firefox: not found /usr/bin/xdg-open: 778: /usr/bin/xdg-open: iceweasel: not found /usr/bin/xdg-open: 778: /usr/bin/xdg-open: seamonkey: not found /usr/bin/xdg-open: 778: /usr/bin/xdg-open: mozilla: not found /usr/bin/xdg-open: 778: /usr/bin/xdg-open: epiphany: not found /usr/bin/xdg-open: 778: /usr/bin/xdg-open: konqueror: not found /usr/bin/xdg-open: 778: /usr/bin/xdg-open: chromium-browser: not found /usr/bin/xdg-open: 778: /usr/bin/xdg-open: google-chrome: not found /usr/bin/xdg-open: 778: /usr/bin/xdg-open: www-browser: not found /usr/bin/xdg-open: 778: /usr/bin/xdg-open: links2: not found /usr/bin/xdg-open: 778: /usr/bin/xdg-open: elinks: not found /usr/bin/xdg-open: 778: /usr/bin/xdg-open: links: not found /usr/bin/xdg-open: 778: /usr/bin/xdg-open: lynx: not found /usr/bin/xdg-open: 778: /usr/bin/xdg-open: w3m: not found xdg-open: no method available for opening 'http://localhost:15000' _______________________________________________ Bioc-devel@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/bioc-devel