Hi Peng,
I was looking through your version bumps, and it looks a little off-track I
have to say. The version bumps you should have in your repository should be
following the order(from the commit below) should be 1.3.0 --> 1.3.1 --> 1.3.2
and so on.
commit c358f5e7d8564423fb60abea7024b01068046ea8
Author: Nitesh Turaga <nitesh.tur...@gmail.com>
Date: 2019-10-29 13:43:32 -0400
bump x.y.z version to odd y after creation of RELEASE_3_10 branch
diff --git a/DESCRIPTION b/DESCRIPTION
index c922ad7..8fff467 100644
--- a/DESCRIPTION
+++ b/DESCRIPTION
@@ -2,7 +2,7 @@ Package: DeMixT
Title: Cell type-specific deconvolution of heterogeneous tumor samples with
two or three components using expression data from RNAseq
or microarray platforms
-Version: 1.2.0
+Version: 1.3.0
But it seems like this order has been lost somehow and you started with 1.4.0
and 1.5.0. I'm actually surprised you were able to push up these changes to the
repository as the git hook should have prevented you from making 1.3.0 -->
1.4.0. An important question is, did you "push" your commits to the
Bioconductor git repository after accumulating multiple commits on your local
machine?
This commit should have been declined by the hook,
commit c17654aa8f76e36faf143deedf0495619567459a
Author: pengyang0411 <pengyang0...@gmail.com>
Date: Sun Jan 12 22:26:37 2020 -0600
update to v1.4.0
diff --git a/DESCRIPTION b/DESCRIPTION
index 62a7290..9b5a6b8 100644
--- a/DESCRIPTION
+++ b/DESCRIPTION
@@ -1,7 +1,7 @@
Package: DeMixT
Title: Cell type-specific deconvolution of heterogeneous tumor samples with
two or three
components using expression data from RNAseq or microarray platforms
-Version: 1.3.0
+Version: 1.4.0
Date: 2020-01-06
And you have this commit(7fa3d1b4e97a48112634452ac752a9fed8ade493) taking it
to 1.5.0 and then this one (f5c7fdc25ed18dc21f16f02bdc20a1805efa2b50) to
1.5.1.
We'll have to figure out a way to fix your version numbers. But as far as the
build report goes, if you pushed all your commits in today, then you'll have to
wait for the nightly builders to produce the build report tomorrow.
We'll get back to you on a path forward.
Best,
Nitesh
________________________________
From: Bioc-devel <bioc-devel-boun...@r-project.org> on behalf of py11
<p...@rice.edu>
Sent: Wednesday, January 15, 2020 7:46 PM
To: bioc-devel@r-project.org <bioc-devel@r-project.org>
Subject: [Bioc-devel] DeMixT issue
Hi Bioconductor team,
I just pushed the latest version from 1.3.1 to 1.3.2 into devel
branch; however, there is no changes on the DeMixT website in
biocondoctor,
https://bioconductor.org/packages/devel/bioc/html/DeMixT.html
Can you help me update it or is there anything I can do?
Thanks,
Peng
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