This seems to be a problem with a recent change to knitr https://github.com/Bioconductor/BiocStyle/issues/71 https://github.com/yihui/knitr/issues/1797
Please follow these issues; it looks like it is fixed in the github repository, but needs to be made available in CRAN for this to be fixed on our build systems. Martin On 1/20/20, 12:00 PM, "Bioc-devel on behalf of Zach Shao" <bioc-devel-boun...@r-project.org on behalf of zach.s...@gmail.com> wrote: Hello, Not sure what to make of this error with building the vingette by bioconductor. The figures are all there. Did something change with knitr? Thank you. Zach ############################################################################## ############################################################################## ### ### Running command: ### ### /home/biocbuild/bbs-3.10-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data ERSSA ### ############################################################################## ############################################################################## * checking for file ‘ERSSA/DESCRIPTION’ ... OK * preparing ‘ERSSA’: * checking DESCRIPTION meta-information ... OK * installing the package to build vignettes * creating vignettes ... ERROR --- re-building ‘ERSSA.Rmd’ using rmarkdown Quitting from lines 45-46 (ERSSA.Rmd) Error: processing vignette 'ERSSA.Rmd' failed with diagnostics: Magick: unable to open image `/tmp/Rtmp9aQlKg/Rbuild6d1427846a56/ERSSA/vignettes/ERSSA_files/figure-html/unnamed-chunk-2-1.png': No such file or directory @ error/blob.c/OpenBlob/2701 --- failed re-building ‘ERSSA.Rmd’ SUMMARY: processing the following file failed: ‘ERSSA.Rmd’ Error: Vignette re-building failed. Execution halted [[alternative HTML version deleted]] _______________________________________________ Bioc-devel@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/bioc-devel _______________________________________________ Bioc-devel@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/bioc-devel