Hi Nitesh, Thanks for the new image.
I have a question regarding the behavior of encountering logicals with a length higher than 1 and its coercion to logical(1) for an if statement. I encountered a bit of a problem, when a unit test returned an error running R CMD check using the Bioconductor docker image: 'length(x) = 2 > 1' in coercion to 'logical(1)' However in a normal session this didn't raise an error. After adding _R_CHECK_LENGTH_1_CONDITION_=true _R_CHECK_LENGTH_1_LOGIC2_=true to /usr/local/lib/R/etc/Renviron.site the behavior matched the output from R CMD check. Is this behavior intended or would you consider adding this setting to the docker image? Best regards Felix -----Ursprüngliche Nachricht----- Von: Bioc-devel <bioc-devel-boun...@r-project.org> Im Auftrag von Turaga, Nitesh Gesendet: Dienstag, 21. Januar 2020 18:41 An: bioc-devel@r-project.org Betreff: [Bioc-devel] New bioconductor_docker image officially released Hello developers, The new "bioconductor/bioconductor_docker" image is officially released. The link to access it on Dockerhub is: https://hub.docker.com/repository/docker/bioconductor/bioconductor_docker. The source code in on GitHub at: https://github.com/bioconductor/bioconductor_docker. Please note there are currently two versions, 1. bioconductor/bioconductor_docker:devel 2. bioconductor/bioconductor_docker:RELEASE_3_10 or bioconductor/bioconductor_docker:latest The previous set of images have been deprecated. The previous images have also been updated with a `LABEL` in the Dockerfile which refers to them as "Deprecated". You can see this information on your image if you do a `docker pull <image_name>; docker inspect <image_name>`. Please note, we will support these images through this release cycle. We highly recommend that you shift to the new images, and use those containers. They come with all the system dependencies to install almost all of the Bioconductor packages, an RStudio interface, and with customizations which are specific to Bioconductor. Docker images are now considered similar to Bioconductor packages. There will be official contributions from the community following our list of best practices<https://github.com/Bioconductor/bioconductor_docker/blob/master/best_practices.md>. If you need more information on the docker images please refer to http://bioconductor.org/help/docker/. As always, if you have any questions, please feel free to reply to this email. Best regards, Nitesh This email message may contain legally privileged and/or confidential information. If you are not the intended recipient(s), or the employee or agent responsible for the delivery of this message to the intended recipient(s), you are hereby notified that any disclosure, copying, distribution, or use of this email message is prohibited. If you have received this message in error, please notify the sender immediately by e-mail and delete this email message from your computer. Thank you. [[alternative HTML version deleted]] _______________________________________________ Bioc-devel@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/bioc-devel _______________________________________________ Bioc-devel@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/bioc-devel