Hello Steffen, Thank you for the response. You are right, and I also recognized it. However, I don’t see the updates from the source package I downloaded from the package webpage at http://bioconductor.org/packages/3.11/bioc/html/atSNP.html. I updated both DESCRIPTION and graphic.R, but neither were updated.
Best, Sunyoung On Feb 17, 2020, at 1:38 AM, Neumann, Steffen <sneum...@ipb-halle.de<mailto:sneum...@ipb-halle.de>> wrote: Hi, please have a look at the build report first: https://nam02.safelinks.protection.outlook.com/?url=http%3A%2F%2Fbioconductor.org%2FcheckResults%2Fdevel%2Fbioc-LATEST%2FatSNP%2F&data=02%7C01%7CSunyoung.Shin%40utdallas.edu%7C5f2f92f942374791fab308d7b37c5b94%7C8d281d1d9c4d4bf7b16e032d15de9f6c%7C0%7C1%7C637175219027370173&sdata=ygVFK7QyLbTTmaq3%2B54W5%2Fg7CL2w0YBMdJf4ZgHImCw%3D&reserved=0 where your commit 2020-02-12 has been picked up. The check has an ERROR, most likely in the examples to plotMotifMatch(). Also, I guess the version 1.3.0 was the version number bumped after the last BioC release, so consider to bump atSNP to 1.3.1 with you next commit. Hope that helped, Yours, Steffen On Mon, 2020-02-17 at 05:10 +0000, Shin, Sunyoung wrote: Dear all, I used "git push upstream master” to commit changes for atSNP package to Bioconductor 4 days ago. But, Bioconductor does not take the updated version, but sticks with the old version of the package, which I committed in October. Does someone have an idea about how to fix it? Thanks. Best, Sunyoung _______________________________________________ Bioc-devel@r-project.org mailing list https://nam02.safelinks.protection.outlook.com/?url=https%3A%2F%2Fstat.ethz.ch%2Fmailman%2Flistinfo%2Fbioc-devel&data=02%7C01%7CSunyoung.Shin%40utdallas.edu%7C5f2f92f942374791fab308d7b37c5b94%7C8d281d1d9c4d4bf7b16e032d15de9f6c%7C0%7C1%7C637175219027370173&sdata=nB10%2BrZJCkXf5CWqHXyQxqaQgIUvP4%2FnkRhLzAwiLnE%3D&reserved=0 -- Current bits of interest: * Computational Metabolomics PhD Position @ IPB https://nam02.safelinks.protection.outlook.com/?url=https%3A%2F%2Fwww.ipb-halle.de%2Fen%2Fcareer%2Fjob-vacancies%2Fjoboffer-detail%2Fwissenschaftlichen-mitarbeiterin-doktorandin-bioinformatikmetabolomics-mwd%2F&data=02%7C01%7CSunyoung.Shin%40utdallas.edu%7C5f2f92f942374791fab308d7b37c5b94%7C8d281d1d9c4d4bf7b16e032d15de9f6c%7C0%7C1%7C637175219027370173&sdata=5ukkqm7owpb0KVwgtS8loZvZ7WmuLKmgfwzgrkihVb0%3D&reserved=0 * Leibniz Plant Biochemistry Symposium, 14./15.05.2020, Halle https://nam02.safelinks.protection.outlook.com/?url=https%3A%2F%2Fevents.ipb-halle.de%2Fevent%2F60%2F&data=02%7C01%7CSunyoung.Shin%40utdallas.edu%7C5f2f92f942374791fab308d7b37c5b94%7C8d281d1d9c4d4bf7b16e032d15de9f6c%7C0%7C1%7C637175219027370173&sdata=%2Bjxec3fj9e%2F%2Fd7CvOueC%2FAWZ%2BGYiRC7Xpx9%2FSanT5P4%3D&reserved=0 * HUPO PSI spring meeting, 23.-25.03.2020, San Diego, CA https://nam02.safelinks.protection.outlook.com/?url=http%3A%2F%2Fwww.psidev.info%2Fhupo-psi-meeting-2020&data=02%7C01%7CSunyoung.Shin%40utdallas.edu%7C5f2f92f942374791fab308d7b37c5b94%7C8d281d1d9c4d4bf7b16e032d15de9f6c%7C0%7C1%7C637175219027370173&sdata=cAjXisCXzOCA9z%2FUXbSi%2F2Oz83vC6fEMlRL6WBH1uTQ%3D&reserved=0 --- IPB Halle AG Massenspektrometrie & Bioinformatik Dr. Steffen Neumann https://nam02.safelinks.protection.outlook.com/?url=http%3A%2F%2Fwww.IPB-Halle.DE&data=02%7C01%7CSunyoung.Shin%40utdallas.edu%7C5f2f92f942374791fab308d7b37c5b94%7C8d281d1d9c4d4bf7b16e032d15de9f6c%7C0%7C1%7C637175219027370173&sdata=3jUg1A%2B3n8KpUR%2FBJEwQVQ%2FRcjf6KU4Ilm2kQUl3XP0%3D&reserved=0 Weinberg 3 Tel. +49 (0) 345 5582 - 1470 06120 Halle +49 (0) 345 5582 - 0 sneumann(at)IPB-Halle.DE Fax. +49 (0) 345 5582 - 1409 [[alternative HTML version deleted]] _______________________________________________ Bioc-devel@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/bioc-devel
