Dear Lori: Thanks for the suggestions. I tried to follow the linked instructions on February 4 and February 9, but was unsuccessful both times (i.e. did not see the changes pushed to the release branch). I tried following the instructions again today. I notice that when I issue the command:
git merge upstream/master I receive the message: merge: upstream/master - not something we can merge So, I clicked on the "Sync existing repositories" tab and checked that the instructions there were working. After adding the upstream branch as follows: git remote add upstream g...@git.bioconductor.org:packages/bigPint.git When I then try to fetch all (git fetch --all), I receive the following error: Fetching origin Fetching upstream FATAL: R any packages/bigpint lrutter DENIED by fallthru (or you mis-spelled the reponame) fatal: Could not read from remote repository. Please make sure you have the correct access rights and the repository exists. error: Could not fetch upstream I changed my GitHub userName about one year ago from "lrutter" to "lindsayrutter". By doing "git remote -v", I can see that my origin branches are correctly at "lindsayrutter", but I am unable to see about my upstream branches on git.bioconductor. This is my output from "git remote -v": origin https://github.com/lindsayrutter/bigPint (fetch) origin https://github.com/lindsayrutter/bigPint (push) upstream g...@git.bioconductor.org:packages/bigpint.git (fetch) upstream g...@git.bioconductor.org:packages/bigpint.git (push) Do you have any advice on how I can fix this issue with fetch upstream possibly expecting my older userName? Thank you for sharing advice. Sincerely, Lindsay 2020年2月3日(月) 21:54 Shepherd, Lori <lori.sheph...@roswellpark.org>: > It looks like you only pushed changes to the master branch which is our > devel branch (3.11). > > Please see the instructions for > http://bioconductor.org/developers/how-to/git/bug-fix-in-release-and-devel/ > > where RELEASE_X_Y would be RELEASE_3_10 for pushing changes to the > release 3.10 branch. > > > > Lori Shepherd > > Bioconductor Core Team > > Roswell Park Comprehensive Cancer Center > > Department of Biostatistics & Bioinformatics > > Elm & Carlton Streets > > Buffalo, New York 14263 > ------------------------------ > *From:* Bioc-devel <bioc-devel-boun...@r-project.org> on behalf of L > Rutter <lindsayannerut...@gmail.com> > *Sent:* Saturday, February 1, 2020 4:18 AM > *To:* bioc-devel@r-project.org <bioc-devel@r-project.org> > *Subject:* [Bioc-devel] R CMD build error for 3.10 (but not 3.11) > > Dear all: > > I have been receiving messages that my Bionconductor package bigPint is > producing errors on 'R CMD build' on malbec1. I believe I discovered the > source of the error, fixed it, and pushed changes to my GitHub account ( > github.com/lindsayrutter) on December 10, 2019. I continued to receive > this > error notification and was advised to ensure I had pushed the changes to > Bioconductor. I pushed changes following these instructions ( > http://bioconductor.org/developers/how-to/git/) on January 4, 2020. I am > still receiving notifications that my package produces errors on 'R CMD > build' on malbec1 ( > > https://master.bioconductor.org/checkResults/3.10/bioc-LATEST/bigPint/malbec1-buildsrc.html > ). > However, it seems my package is no longer failing daily build reports for > version 3.11 as of January 4, 2020 ( > http://bioconductor.org/checkResults/3.11/bioc-LATEST/). > > I am seeking advice on what a maintainer should try in this situation? Is > it possible my changes were only recognized in version 3.11 but not version > 3.10? Thank you for any advice you may have! > > Sincerely, > L. Rutter > > [[alternative HTML version deleted]] > > _______________________________________________ > Bioc-devel@r-project.org mailing list > https://stat.ethz.ch/mailman/listinfo/bioc-devel > > This email message may contain legally privileged and/or confidential > information. If you are not the intended recipient(s), or the employee or > agent responsible for the delivery of this message to the intended > recipient(s), you are hereby notified that any disclosure, copying, > distribution, or use of this email message is prohibited. If you have > received this message in error, please notify the sender immediately by > e-mail and delete this email message from your computer. Thank you. [[alternative HTML version deleted]] _______________________________________________ Bioc-devel@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/bioc-devel
