I have a feeling that the best way to get action here will be to file an issue and perhaps a PR at https://github.com/Bioconductor/Biostrings
On Sat, Mar 7, 2020 at 7:12 AM Ulrich Bodenhofer <bodenho...@bioinf.jku.at> wrote: > Dear colleagues, > > As noted in my previous message, I have encountered problems with the > new way of displaying sequences/sequence sets that now use a UTF-8 > ellipsis character (internally defined as R object 'compact_ellipsis' in > the package) when the output is included in a LaTeX document (which > happens when printing biological sequences via the 'Biostrings' package > inside LaTeX-based Sweave or knitr documents). My question again: Is > there any special measure that I can take to counteract this issue? > (e.g. like loading \usepackage[xxx]{inputenc} in the vignette, setting > an option, or manually refining 'compact_ellipsis') Is there a way that > the users can revert to the old-style dots for such cases? > > As a sidenote: this causes the building of my package 'apcluster' to > break on a non-UTF-8 locale > ( > https://www.r-project.org/nosvn/R.check/r-devel-linux-x86_64-debian-clang/apcluster-00check.html), > > but leads to warnings also in a UTF-8 locale. > > Any help is gratefully appreciated, thanks so much in advance! > > Best regards, > Ulrich > > _______________________________________________ > Bioc-devel@r-project.org mailing list > https://stat.ethz.ch/mailman/listinfo/bioc-devel > -- The information in this e-mail is intended only for the ...{{dropped:18}} _______________________________________________ Bioc-devel@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/bioc-devel