Please ignore this for now. The reviewer is also aware to ignore. We think
this is related to how we are building/checking the packages and are
investigating a solution.
Lori Shepherd
Bioconductor Core Team
Roswell Park Comprehensive Cancer Center
Department of Biostatistics & Bioinformatics
Elm & Carlton Streets
Buffalo, New York 14263
________________________________
From: Bioc-devel <bioc-devel-boun...@r-project.org> on behalf of Ilyess RACHEDI
<ilye...@hotmail.fr>
Sent: Friday, February 12, 2021 3:34 AM
To: bioc-devel@r-project.org <bioc-devel@r-project.org>
Subject: [Bioc-devel] Problem with my setters on Windows during the build and
the check
Dear community,
When my package is building, I have this error that I have only on Windows and
only for my setters. For example for my setter setExperimentName, I have :
for R CMD check :
Rd warning: cannot open file
'C:/Users/pkgbuild/packagebuilder/workers/jobs/1830/d043cea2e7e43217f0b1e3db496685374ac7ef8d/conclus.buildbin-libdir/00LOCK-conclus/00new/conclus/help/setExperimentName<-,scRNAseq-method.html':
Invalid argument
And for R CMD build :
REDIRECT:topic setExperimentName<-,scRNAseq-method -> setters.html [ FAIL ]
REDIRECT:topic setExperimentName<- -> setters.html [ FAIL ]
REDIRECT:topic setExperimentName -> setters.html [ SUCCESS ]
After several tests, I can say that it is the character "<" to define my
setters "foo<-" which is problematic.
Also, I don't understand why Windows wants to open file
"setExperimentName<-,scRNAseq-method.html" while the only man page I create for
my setters is setters.Rd
I don't have these warnings with Ubuntu and MacOS.
Has anyone ever had this warning and would have a solution please?
Best,
Ilyess
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