Dear all, I have recently been notified of errors during the build of ncRNAtools in the devel branch. Since the errors are not showing up in release, I tried to set up a correct devel environment to check the problems.
I first downloaded R 4.1.0 from https://mac.r-project.org I then set up BioC 3.13 with the following: if (!requireNamespace("BiocManager", quietly=TRUE)) install.packages("BiocManager") BiocManager::install(version = "devel") I then checked if the environment was valid with BiocManager::valid() which returned TRUE. However, when attempting to install ncRNAtools, I got the following: > BiocManager::install("ncRNAtools") 'getOption("repos")' replaces Bioconductor standard repositories, see '?repositories' for details replacement repositories: CRAN: https://cran.rstudio.com/ Bioconductor version 3.13 (BiocManager 1.30.12), R 4.1.0 alpha (2021-04-29 r80247) Installing package(s) 'ncRNAtools' Warning message: package �ncRNAtools� is not available for this version of R A version of this package for your version of R might be available elsewhere, see the ideas at https://cran.r-project.org/doc/manuals/r-patched/R-admin.html#Installing-packages Does anybody have any advice on how to proceed to manage to install ncRNAtools in a valid Bioc devel environment? I am leaving below the output of sessionInfo() R version 4.1.0 alpha (2021-04-29 r80247) Platform: x86_64-apple-darwin17.0 (64-bit) Running under: macOS Big Sur 10.16 Matrix products: default LAPACK: /Library/Frameworks/R.framework/Versions/4.1/Resources/lib/libRlapack.dylib locale:[1] en_US.UTF-8/en_US.UTF-8/en_US.UTF-8/C/en_US.UTF-8/en_US.UTF-8 attached base packages: [1] stats graphics grDevices utils datasets methods base loaded via a namespace (and not attached): [1] BiocManager_1.30.12 compiler_4.1.0 tools_4.1.0 Thanks a lot in advance! Best wishes, Lara Lara Selles lara.selle...@imperial.ac.uk [[alternative HTML version deleted]]
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