Dear Selvi, It looks like a transient issue that happens on and off.
I’m not sure there is any special insight I can offer here. I do not think any action is needed on your end. Best, Nitesh Nitesh Turaga Scientist II, Department of Data Science, Bioconductor Core Team Member Dana Farber Cancer Institute > On Oct 25, 2021, at 12:00 PM, Tamilselvi Guharaj <se...@ds.dfci.harvard.edu> > wrote: > > Dear Bioconductor Core Team, > > The bumphunter package is exhibiting errors under the Linux and Windows > platforms due to a file download failure from the GENCODE FTP server at the > time of the daily multi-platform build/check testing for BioC 3.14. > *https://bioc.ism.ac.jp/packages/checkResults/devel/bioc-LATEST/bumphunter/ > <https://bioc.ism.ac.jp/packages/checkResults/devel/bioc-LATEST/bumphunter/>* > > *FTP Server File Download Error:* > Error in `download.file(resource(con), destfile)`: cannot open URL ' > ftp://ftp.ebi.ac.uk/pub/databases/gencode/Gencode_human/release_25/gencode.v25.annotation.gtf.gz > ' > > The file is downloading fine on our end. We routinely see this error in the > daily testing reports and it goes away in a day or two. But it seems to be > persistent for the past five days or so. > > Are such errors accepted or do we need to take any action from our end? > > Thank you very much in advance for any input. > > Thanks, > Selvi > > [[alternative HTML version deleted]] > > _______________________________________________ > Bioc-devel@r-project.org mailing list > https://stat.ethz.ch/mailman/listinfo/bioc-devel _______________________________________________ Bioc-devel@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/bioc-devel
