How about in the YAML:
params:
configuration: NULL
project_conf: NULL
data: NULL
Then in the first chunk something like:
```{r data-config}
if(is.null(params$data)){
data(data_ionstar, package = "prolfqua")
data = data_ionstar
configuration = data$filtered()$config
}
```
You can use a more ornate expression for these parameters when rendering
otherwise `rmarkdown::render()`, which I suppose you could call from a Makefile
if needed when rendering package the vignettes.
Andrew McDavid
Biostatistics and Computational Biology
University of Rochester Medical Center
On Nov 19, 2021, at 6:00 AM,
bioc-devel-requ...@r-project.org<mailto:bioc-devel-requ...@r-project.org> wrote:
If anyone wonders, why do I need it. By this I can reuse the vignette
with a different dataset.
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