It looks like it actually clean in today's build report. But for the sake of argument: Ideally we would want ERROR's resolved as soon as possible. If you waited until R release 4.2, you will likely have to import the fixes to both the release and devel branches of Bioconductor as the Bioconductor release immediately follows the release of R.
Cheers, Lori Shepherd - Kern Bioconductor Core Team Roswell Park Comprehensive Cancer Center Department of Biostatistics & Bioinformatics Elm & Carlton Streets Buffalo, New York 14263 ________________________________ From: Bioc-devel <bioc-devel-boun...@r-project.org> on behalf of migdal migdal <mcjmig...@gmail.com> Sent: Thursday, April 7, 2022 11:22 AM To: bioc-devel@r-project.org <bioc-devel@r-project.org> Subject: Re: [Bioc-devel] midasHLA problems reported in the Multiple platform build/check report for BioC 3.15 Hi, one of my packages started to fail under the new R version, I started to investigate but the issue appears to be not straightforward to solve and somehow related to the changes introduced in R4.2. As the R is still in the prelease unstable version I would prefer to wait until official release before I start to invest more time in creating a reproducible example and seeking help online. Given the shortly upcoming Bioconductor 3.15 release, my question is are there any consequences if these errors will not be resolved before the release date or can I take my time here? Best MM On Wed, 6 Apr 2022 at 19:00, <bbs-nore...@bioconductor.org> wrote: > [This is an automatically generated email. Please don't reply.] > > Hi midasHLA maintainer, > > According to the Multiple platform build/check report for BioC 3.15, > the midasHLA package has the following problem(s): > > o ERROR for 'R CMD build' on nebbiolo1. See the details here: > > https://secure-web.cisco.com/11FQyP5LRTnZ51jZl-mB1WkkYADREm06RG8bqKhOsOhn8MLVaC5ns8HbX_U91KgnYYtEIWc5s_F4eL9ED9A1fobFZm_4BeNNl3wMiM7L-Z5vS6ZTjV9Ime6KNQTFOTOluGaSZpQiPmby36J-XWMl9xciF6L3IKGsX_O-MMuBJHgeCtWKkVDM4sAawp3MwPw1ENtnBs9S9GayIMICwo0vErOB10WvkJWH4gfiOwjTcRHucyTMitxIyrI4oprIVFPuTo0YdqDqcNluDnehhhvnyN2iCaK9RRc3yBpY9PbZGEqZacF9ZdgPeBrGSQUuL1pe5/https%3A%2F%2Fmaster.bioconductor.org%2FcheckResults%2F3.15%2Fbioc-LATEST%2FmidasHLA%2Fnebbiolo1-buildsrc.html > > Please take the time to address this by committing and pushing > changes to your package at git.bioconductor.org > > Notes: > > * This was the status of your package at the time this email was sent to > you. > Given that the online report is updated daily (in normal conditions) > you > could see something different when you visit the URL(s) above, > especially if > you do so several days after you received this email. > > * It is possible that the problems reported in this report are false > positives, > either because another package (from CRAN or Bioconductor) breaks your > package (if yours depends on it) or because of a Build System problem. > If this is the case, then you can ignore this email. > > * Please check the report again 24h after you've committed your changes > to the > package and make sure that all the problems have gone. > > * If you have questions about this report or need help with the > maintenance of your package, please use the Bioc-devel mailing list: > > > https://secure-web.cisco.com/1Pt8flDqQliflJ00syYl1duQEBg1pgiExazLbm8Jp8seBzvSSKlREtEdOzlt5F2dKaKRqa6GeAFciEcjmNBVjpPFrBqZBcfuPzKyTYxYp0QWWvjromPzgh_yjByzKq7g7UoLdSYNzNikd8b7rnOwCI-BCDYHtwBuNXIsC3xa6nVAGLw180tdUD1Gz-uWz0YRZ0cbGS-jslnHDD74f-TrUXUVXJ9es0SadfQsgtKqv8SdpKmStUt7sSTqOIE_INNV-aqI12wQoolfK_gxjOFGIBW_OGt2TK-LdwrqJXCDow4WPfbVtbNvhcOoU2aQYkgKc/https%3A%2F%2Fbioconductor.org%2Fhelp%2Fmailing-list%2F > > (all package maintainers are requested to subscribe to this list) > > For immediate notification of package build status, please > subscribe to your package's RSS feed. 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