The 'master' branch on Bioconductor has been deprecated for over a year and recently removed from access. The default branch in Bioconductor is now 'devel'. See https://support.bioconductor.org/p/9149923/
You can also check out the instructions at https://contributions.bioconductor.org/git-version-control.html#new-package-workflow specificially #5 that shows how to push a differently named branch like a locally named 'main' branch pushing to 'devel' on Bioconductor git push upstream main:devel Lori Shepherd - Kern Bioconductor Core Team Roswell Park Comprehensive Cancer Center Department of Biostatistics & Bioinformatics Elm & Carlton Streets Buffalo, New York 14263 ________________________________ From: Bioc-devel <[email protected]> on behalf of Brendan Miller <[email protected]> Sent: Saturday, November 16, 2024 2:58 PM To: [email protected] <[email protected]> Subject: [Bioc-devel] Unable to push changes to [email protected]:packages Hello Everyone, I have made some changes to my package that I would like to push to [email protected]:packages, however, I am getting some errors I cannot figure out and was wondering if anyone has any insight? Something about a declined hook: I am on the `master` branch of my package, which I have configured to represent the branch I have synced with Bioconductor. My upstream bioconductor remote branches: upstream [email protected]:packages/STdeconvolve.git (fetch) upstream [email protected]:packages/STdeconvolve.git (push) Package version was previously '1.11.0` so I bumped to '1.11.1` with latest changes to push. git checkout master git push upstream master Enumerating objects: 180, done. Counting objects: 100% (180/180), done. Delta compression using up to 8 threads Compressing objects: 100% (140/140), done. Writing objects: 100% (156/156), 7.51 MiB | 3.07 MiB/s, done. Total 156 (delta 75), reused 0 (delta 0), pack-reused 0 remote: Resolving deltas: 100% (75/75), completed with 17 local objects. remote: FATAL: W refs/heads/master packages/STdeconvolve bmill3r DENIED by fallthru remote: error: hook declined to update refs/heads/master To git.bioconductor.org:packages/STdeconvolve.git ! [remote rejected] master -> master (hook declined) error: failed to push some refs to 'git.bioconductor.org: packages/STdeconvolve.git' Does anyone know what the issue could be? Thank you all in advance. [[alternative HTML version deleted]] _______________________________________________ [email protected] mailing list https://secure-web.cisco.com/1GQKa_AHkM03v7_Q1vLOFGb9JB9j1z8AUjQhJ1d8hiu19AKZ4rmAd3_COMjX3nW8yB4ukLeSgH1n3Z5ykVlkce58tNOM_lyTZ7_c7509flmD2osqnMO2ES14FDRrpSQuOWDvpDsJ4IzkUoi-_XPkXVmTxTgwY8-JXYx_04zcOEZh_cGe4jwmYlQVbK-_Q7nVuZy1vm4xfBVjhzuAPjoCahRLn8hPsZQm_jkrKgdqUnci9VgiolHsiur1uXlSctH9CavWLbfFUixVO3389OG2i4f51d1Hagm3paaj4bhBPtUfXuf_7FlOmXCG2kRZYu9vU/https%3A%2F%2Fstat.ethz.ch%2Fmailman%2Flistinfo%2Fbioc-devel This email message may contain legally privileged and/or confidential information. If you are not the intended recipient(s), or the employee or agent responsible for the delivery of this message to the intended recipient(s), you are hereby notified that any disclosure, copying, distribution, or use of this email message is prohibited. If you have received this message in error, please notify the sender immediately by e-mail and delete this email message from your computer. Thank you. [[alternative HTML version deleted]] _______________________________________________ [email protected] mailing list https://stat.ethz.ch/mailman/listinfo/bioc-devel
