Hi everyone, I am doing NGS analysis using bam files.I have counted reads in 3'utr region usingĀ utr=threeUTRsByTranscript(txdb,use.names=FALSE) countsUTR <- countOverlaps(utr,reads) I have got the transcript level counts from this.How can I get the gene level counts??It might sound silly but Does anybody have an idea on what type of anaylses we can do from this countsUTR ? Thanks,Rohan [[alternative HTML version deleted]]
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