Hi Nidhi,
   You can go through the tool miRNAfinder. It gives comparitively good
results. miRNAs are predicted based on the stem loop structure, free energy,
homolog in relative species, etc.

On Tue, Feb 17, 2009 at 12:29 AM, nidhi tanwar <tanwar.nid...@gmail.com>wrote:

> sir
>
> i have to find computationally miRNAs from rice genome.
>
> tell me the steps(methodology) for programming in perl alongwith the
> conditions to be applied for predicting miRNAs.
>
> also tell some online tools for predicting miRNAs which give reliable
> results.
>
> thanks
>
> >
>


-- 
With Love,
 Manila

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