ans 1.U cud take any DNA or AA seq although I wud prefer DNA seq for a
faster result.
ans 2. blastp is for protein seq search(Search protein database using a
protein query)
blastn is for nucleotide(DNA) seq search(Search a nucleotide
database using a nucleotide query)
blastx is for searching protein database using a translated
nucleotide query
ans 3.try NCBI and EBI . dat wud be enuf to give u loads of results.
ans 4.search my dear friend . u can even search in ncbi's books and journals
DBs.
---~-~--------------~~-------------~-~----
Sender:Ankur Shrestha
reply to:ankurshres...@gmail.com <to%3aankurshres...@gmail.com>
--~---------------~~-----------------~~---
On Wed, May 20, 2009 at 5:22 PM, ....... <pagalladkih...@gmail.com> wrote:
> hello everybody
>
> i want to work on cmoparative phylogenetic analysis of genes involved in
> prolein metabolism of arabidopsis.i have got 5 genes avaialble wth me.can
> smbody tell me the procedure or the steps to get started with work
>
> 1)shuould i take protein sequences or dna sequences
> 2)should i do blastn,blastp,blastx or so
> 3)what all databases shuold i c for the information
> 4)from where to get the relevant research papers
>
> has anybody done smwork like this b4.or of similar type.
> its urgent so if smbody got sm information regarding this please tell or
> suggest smthing god or new what could be done
>
> suggestions are invited
>
> thanks in advance
>
>
> >
>
--~--~---------~--~----~------------~-------~--~----~
Dear Member,
http://www.cbclickbank.com/biofriend/
Biofriend is now with great features. Like No email, catgorywise que & ans.
rating and much more visit biofriend and We are sure, You will definitely like
it.
Ask your question Here !
http://www.cbclickbank.com/biofriend/
Get your Answers.
Support Us to Help Others
Biofriend India Team
Please visit this link & send your friends too
=========================================
" No email " visit
http://www.cbclickbank.com/bioinformatics/giudence.htm
-~----------~----~----~----~------~----~------~--~---
