I see. I will replicate it first and try to improve the efficiency then!

Cheers,
Kenneth

On Mon, Oct 24, 2011 at 07:02, Christian Höner zu Siederdissen <
[email protected]> wrote:

> Hi,
>
> actually it is not different. But it is a good idea to start with the
> smallest interesting problem and you can check that you actually produce
> the same results as the existing code.
>
> But you are free to choose another instance of the alignment problem, if
> you like.
>
> Gruss,
> Christian
>
> * Kenneth Lui <[email protected]> [21.10.2011 10:39]:
> >    I am trying to understand the code in the Alignment module. Since
> AAlign
> >    already has a global_align function, how is that different from the
> >    "needlemanWunsch :: M -> G -> S -> S -> (Score,[(Int,Int)])" that you
> >    mentioned? Or I should look for ways to improve that? Thanks!
> >    Cheers,
> >    Kenneth
> >
>



-- 
*Kenneth Lui*
Computer Science Major (Class of 2012)
University of British Columbia, Vancouver, Canada
Email: [email protected]
Phone number: 778 - 319 - 4321 (Canada)
Website: http://ca.linkedin.com/in/hkkenneth
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