Hi, it seems that I desperately need to update some documentation. a mostly up-to-date version is here: http://www.tbi.univie.ac.at/~choener/haskell.html
Basically, "Biobase" itself is mostly deprecated, while anything that has Biobase as a prefix is alive (again...). The problem is that I started out with a number of libraries, then thought to put them all together... and then Ketil and I met in Vienna and thought that it would be nice to have small libraries that each do one thing. Thanks for telling me how to get libraries removed from hackage, I'll send a mail to have everything removed that is dead. I need to clean up some stuff first, but it should be done anyway. Regarding patches, we should try to get that phone call to happen ;-) Gruss, Christian * Felipe Almeida Lessa <[email protected]> [29.10.2011 02:33]: > On Fri, Oct 28, 2011 at 10:25 PM, Christian Höner zu Siederdissen > <[email protected]> wrote: > > Depending on what you are doing, I'll maybe send patches so that there > > won't be too much duplication regarding Infernal-related stuff. > > I was going to do the opposite and send you patches ;-). > > Alas, what's the state of Biobase? The wiki [1] says that BioBase* is > deprecated, so is BioBase going in the opposite direction and becoming > a larger library =)? In general I prefer smaller libraries, but a big > library isn't problematic. I'm asking just because Hackage's > Bioinformatics category [2] currently is a mess and it's difficult to > see what's new and what's not. If those packages are deprecated, it > would be nice to drop a line to Ross Patterson <[email protected]> > asking him to remove them from the list. > > Cheers! =) > > [1] http://biohaskell.org/Libraries > [2] http://hackage.haskell.org/package/#cat:bioinformatics > > -- > Felipe.
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