Zhang, Yongqing (NIH/NIA/IRP) [E] has canceled this event: Canceled: Biowulf 20th anniversary
seminar series: Ryan Dale (NICHD)
Title:
Canceled: Biowulf 20th anniversary seminar series: Ryan Dale (NICHD)
Location:
This talk will be videocast at https://videocast.nih.gov/summary.asp?live=31795
When:
Tuesday, April 9, 2019 11:00 AM – 12:30 PM
Organizer:
Zhang, Yongqing (NIH/NIA/IRP) [E] <[email protected]>
Description:
_____________________________________________ From: Susan Chacko
<[email protected]<mailto:[email protected]>> Sent: Thursday, March 28, 2019 9:19 AM To: List
BIOINFORMATICS-SIG-L <[email protected]<mailto:[email protected]>>
Subject: Biowulf 20th anniversary seminar series: Ryan Dale (NICHD) The Biowulf 20th Anniversary
Seminar Series continues with: Integrative analyses of gene regulation via long-range chromatin
interactions [cid:[email protected]]Ryan Dale (Scientific Information Officer and
Bioinformatics Core Lead, NICHD) Tuesday, 9 April 2019 11 am - noon Bldg 50, Rm 1227 This talk
will be videocast at https://videocast.nih.gov/summary.asp?live=31795 Abstract: Throughout
development, gene expression is regulated in part by interactions between gene promoters and
distal enhancers that can be tens or hundreds of kilobases away. Our recent work has identified
novel mechanisms of such long-range regulation in fly and mouse models. In Drosophila, Argonaute2
is canonically part of the post-transcriptional siRNA silencing machinery. We show it also plays a
role in transcription regulation via chromatin topology and RNA PolII phosphorylation though
integrative analysis of RNA-seq, ChIP-seq, ChRIP-seq, and 4C-seq assays. In mouse, the erythroid
transcription factor LDB1 is known to homodimerize to facilitate enhancer-promoter interactions,
but by combining new data with published work we show that it can also interact with the
architectural protein CTCF to promote the erythroid gene program in mouse. The software
infrastructure that makes such integrative analyses possible -- and reproducible -- will also be
highlighted. ________________________________ To unsubscribe from the BIOINFORMATICS-SIG-L list,
click the following link: http://list.nih.gov/cgi-bin/wa.exe?SUBED1=BIOINFORMATICS-SIG-L&A=1
Attachments:
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Comment:
Attendees:
Susan Chacko <[email protected]>
List BIOINFORMATICS-SIG-L <[email protected]>
Cho, Sungkweon (NIH/NCI) [F] <[email protected]>
Chau, Joanna (NIH/NHGRI) [C] <[email protected]>
Vogtmann, Emily (NIH/NCI) [E] <[email protected]>
Abrams, Natalie (NIH/NCI) [E] <[email protected]>
Fisher, Brian (NIH/VRC) [E] <[email protected]>
Wang, Xiang (NIH/NIAMS) [F] <[email protected]>
Connor, Ryan (NIH/NLM/NCBI) [C] <[email protected]>
Prasad, Arjun (NIH/NLM/NCBI) [E] <[email protected]>
Zhang, Yongliang (NIH/NIDDK) [E] <[email protected]>
Vural, Suleyman (NIH/NCI) [F] <[email protected]>
Perez Guijarro, Eva (NIH/NCI) [F] <[email protected]>
Fleischmann, Lydia (NIH/NLM/NCBI) [C] <[email protected]>
Brister, James (NIH/NLM/NCBI) [E] <[email protected]>
Bindewald, Eckart (NIH/NCI) [C] <[email protected]>
Hu, Gangqing (NIH/NHLBI) [E] <[email protected]>
Link, Verena (NIH/NIAID) [C] <[email protected]>
Kim, Erika (NIH/NHGRI) [E] <[email protected]>
Pekowska, Aleksandra (NIH/NIAMS) [F] <[email protected]>
Chereji, Razvan (NIH/NICHD) [E] <[email protected]>
Hefferon, Timothy (NIH/NLM/NCBI) [E] <[email protected]>
Hafner, Markus (NIH/NIAMS) [E] <[email protected]>
Michaelides, Mike (NIH/NIDA) [E] <[email protected]>
Hu, Ying (NIH/NCI) [E] <[email protected]>
Johnson, Randall (NIH/NCI) [C] <[email protected]>
List BIOINFO-GENERAL-NCI <[email protected]>
Hufnagel, Robert (NIH/NEI) [E] <[email protected]>
Davis, Sean (NIH/NCI) [E] <[email protected]>
Su, Qin (NIH/NIAID) [E] <[email protected]>
Merchant, Anand (NIH/NCI) [C] <[email protected]>
Jia, Li (NIH/NCI) [C] <[email protected]>
Gillanders, Elizabeth (NIH/NCI) [E] <[email protected]>
Schwardt, Nicole (NIH/NIAMS) [F] <[email protected]>
Marcum, Chris (NIH/NHGRI) [E] <[email protected]>
Iben, James (NIH/NICHD) [F] <[email protected]>
Kirilusha, Anthony (NIH/NIAMS) [E] <[email protected]>
Kelly, Michael (NIH/NCI) [C] <[email protected]>
Mullikin, Jim (NIH/NHGRI) [E] <[email protected]>
Rodgers-Lee, John (NIH/NIMH) [C] <[email protected]>
Chen, Weiping (NIH/NIDDK) [E] <[email protected]>
Maraia, Richard (NIH/NICHD) [E] <[email protected]>
Fang, Jianwen (NIH/NCI) [E] <[email protected]>
Koparde, Vishal (NIH/NCI) [C] <[email protected]>
Marenco, Stefano (NIH/NIMH) [E] <[email protected]>
Dagur, Pradeep (NIH/NHLBI) [E] <[email protected]>
Joseph, Paule (NIH/NINR) [E] <[email protected]>
Cheng, Hui (NIH/NIDCD) [E] <[email protected]>
Hakkinen, Pertti (NIH/NLM) [E] <[email protected]>
Skarzynski, Martin (NIH/NCI) [F] <[email protected]>
Squires, Richard (NIH/NIAID) [C] <[email protected]>
Clark, Karen (NIH/NLM/NCBI) [E] <[email protected]>
Thakur, Nishant (NIH/NIAID) [F] <[email protected]>
Subramanian, Poorani (NIH/NIAID) [C] <[email protected]>
Lichten, Michael (NIH/NCI) [E] <[email protected]>
Chandramouliswaran, Ishwar (NIH/NIAID) [E]
<[email protected]>
Erdos, Mike (NIH/NHGRI) [E] <[email protected]>
Reardon, Matt (NIH/NIAID) [C] <[email protected]>
Burgess, Shawn (NIH/NHGRI) [E] <[email protected]>
Pacholewska, Alicja (NIH/NIA/IRP) [F] <[email protected]>
Koren, Sergey (NIH/NHGRI) [E] <[email protected]>
Fear, Justin (NIH/NIDDK) [F] <[email protected]>
Youngmi Ji <[email protected]>
Ji, Youngmi (NIH/NIDCR) [C] <[email protected]>
Benson, Mark (NIH/NCI) [C] <[email protected]>
Pillai, Ajay (NIH/NHGRI) [E] <[email protected]>
Klemm, Juli (NIH/NCI) [E] <[email protected]>
Wiley, Ken (NIH/NHGRI) [E] <[email protected]>
Similuk, Morgan (NIH/NIAID) [E] <[email protected]>
Canagarajah, Bertram (NIH/NIDDK) [E] <[email protected]>
Kim, Lewis (NIH/NIAID) [C] <[email protected]>
Rudd, Meghan (NIH/NHGRI) [E] <[email protected]>
Mechanic, Leah (NIH/NCI) [E] <[email protected]>
Barnett, Jason (NIH/NIAID) [C] <[email protected]>
Farrell, Catherine (NIH/NLM/NCBI) [E] <[email protected]>
Luo, Wen (NIH/NCI) [C] <[email protected]>
Shatz, Maria (NIH/NIEHS) [C] <[email protected]>
Wu, Dongjing (NIH/NCI) [C] <[email protected]>
Sonkin, Dmitriy (NIH/NCI) [E] <[email protected]>
Kattman, Brandi (NIH/NLM/NCBI) [E] <[email protected]>
Mao, Jean (NIH/CIT) [E] <[email protected]>
Tsang, John (NIH/NIAID) [E] <[email protected]>
Leerkes, Maarten (NIH/NHLBI) [E] <[email protected]>
Munger, Eric (NIH/OD/ORS) [E] <[email protected]>
Aiyetan, Paul (NIH/NCI) [C] <[email protected]>
Sun, Hong-Wei (NIH/NIAMS) [E] <[email protected]>
Dolan, Michael A. (NIH/NIAID) [E] <[email protected]>
Kuhn, Skyler (NIH/NCI) [C] <[email protected]>
Lobanov, Alexei (NIH/NCI) [C] <[email protected]>
Nelson, George (NIH/NCI) [C] <[email protected]>
Finney, Richard (NIH/NCI) [E] <[email protected]>
Markowitz, Tovah (NIH/NIAID) [C] <[email protected]>
Schaughency, Paul (NIH/NIAID) [C] <[email protected]>
Zhu, Bin (NIH/NCI) [E] <[email protected]>
de Pereira Barreira, Sofia (NIH/NHGRI) [F] <[email protected]>
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