Hello Everyone, I am looking for a Computational Biologist position. I am an experienced computational biologist specializing in high-dimensional statistical and machine learning analysis, software and methods development, molecular modeling, molecular dynamics simulation, and bioinformatics. Accomplished driving projects from concept through data analysis to publication. Proficient in several programming languages, software tools, data science packages, and high-performance computing. Google Scholar h-index 11, i10-index 12<https://scholar.google.co.uk/citations?user=CjajTzYAAAAJ&hl=en>.
In my current position at the Center for Human Immunology (CHI), NIAID, NIH I * Developed HDStIM<https://cran.r-project.org/package=HDStIM>, a novel high-dimensional method for analyzing single-cell signaling responses to immune cell stimulations (mass cytometry). * Applied the HDStIM approach to integrate human population variation and single-cell response heterogeneity in a pediatric cohort to generate new hypotheses on human immune development. Followed by several other high-parameter studies. * Developed a machine-learning framework for identifying circulating blood proteins predictive of early and late COVID-19 recoverers. * Developed a novel statistical method for discovering alternative marker(s) in manually gated cell populations in flow cytometry. * Implemented an automated and high-dimensional analysis pipeline for mass/flow cytometry data. * Executed a pilot to establish a spatial transcriptomics analysis pipeline. * Tested and implemented several off-the-shelf analysis pipelines and solutions. I am attaching my resume to this email and would greatly appreciate any leads. Thank you, Rohit -- Rohit Farmer, Ph.D. Computational Biologist, CHI/NIAID/NIH Mobile Phone: 314-255-6763 https://rohitfarmer.github.io
