Dear Concerned, I am attempting to read in a Fasta file of amino acid sequences using the Alphabet "PROTEIN-TERM" and I am sporadically getting an Illegalsymbolexception which states
"This tokenization doesn't contain character: 'M'" The code causing the exception is as follows BufferedInputStream is = new BufferedInputStream(new FileInputStream(filename)); Alphabet alpha= ProteinTools.getTAlphabet(); SequenceDB db = SeqIOTools.readFasta(is, alpha); Thanking you in advance Saif ------------------------------------------------------------------------------- Saif Ur-Rehman Research Student Phone: +44 (0)1334 46 3362 Email:[EMAIL PROTECTED] http://bio.st-andrews.ac.uk/staff/su24.htm The Centre for Evolution, Genes & Genomics (CEGG), University of St Andrews ------------------------------------------------------------------ University of St Andrews Webmail: https://webmail.st-andrews.ac.uk _______________________________________________ Biojava-l mailing list - Biojava-l@lists.open-bio.org http://lists.open-bio.org/mailman/listinfo/biojava-l
