Hi biojava-l
I have a huge number of small sequences in an Array (ListArray<Sequence<?>>)
which for server start and stop I would like to store on disk. Unfortunately
Sequence is not serilizable, so I searched and found that
GenbankWriterHelper.writeSequences(OutputStream os, Collection<Sequence<?>>
seqs) should be able to do the job.
However when looking at GenbankReaderHelper, there are no methods which
correspond to the above writer method. Am I on the wrong track completely?
When looking at the writer/reader helpers, I think I remember reading that they
are rudimentary and save only the sequence (fasta)? I would expect in such an
advanced verision of biojava (4.0 is being prepared?) that there must be a
standard way to serialize rich sequences/arrays of them in order to send them
around on streams/Json etc?
Any help would be appreciated
CheersStefan
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