Steffen Möller pushed to branch master at Debian Blends Team / med
Commits: c85afb9d by Steffen Möller at 2019-08-22T12:55:26Z Update python- to python3, some more recent packages Some maybe better show up only on bio-dev - - - - - 1 changed file: - tasks/bio Changes: ===================================== tasks/bio ===================================== @@ -50,7 +50,7 @@ Recommends: boxshade, fastx-toolkit, gff2aplot, muscle, sim4, sibsim4, tabix Suggest: tophat-recondition -Recommends: maqview +Recommends: maqview Recommends: blasr @@ -258,8 +258,6 @@ Recommends: acedb-other Recommends: blixem, dotter, belvu -Recommends: python-cogent - Recommends: paml Recommends: velvetoptimiser @@ -916,25 +914,33 @@ Recommends: psipred Recommends: pssh2 -Recommends: python3-pybel +Suggests: python3-alignlib + +Recommends: python3-cogent Recommends: pycorrfit Recommends: pyscanfcs -Recommends: python3-deeptools +Recommends: python3-deeptools, python3-deeptoolsintervals Recommends: python3-geneimpacts Recommends: python3-gffutils +Suggests: python3-loompy + +Recommends: python3-pybel + +Suggests: python3-py2bit + Recommends: python3-pybedtools Recommends: python3-sqt -Recommends: python-reaper +Recommends: python3-reaper -Recommends: python-treetime +Recommends: python3-treetime Recommends: qcumber @@ -1243,9 +1249,9 @@ Recommends: r-cran-tcr, r-cran-tigger, r-cran-alakazam, r-cran-shazam, igor, r-c Recommends: ncbi-igblast -Suggests: python-pyflow +Suggests: python3-pyflow -Recommends: pigx-rnaseq +Recommends: pigx-rnaseq, pigx-scrnaseq X-Mark: The information below needs to be checked whether it can be obtained from Vcs or needs to stay here @@ -2598,7 +2604,7 @@ Pkg-Description: annotate genetic variants detected from diverse genomes "variants reduction" procedure, making it practical to handle hundreds of human genomes in a day. -Recommends: python-orange +Recommends: python3-orange License: GPLv3 Homepage: http://orange.biolab.si/ Pkg-URL: http://orange.biolab.si/debian/ View it on GitLab: https://salsa.debian.org/blends-team/med/commit/c85afb9d56a3ff1de5d54ac94c75f45ebdcb507d -- View it on GitLab: https://salsa.debian.org/blends-team/med/commit/c85afb9d56a3ff1de5d54ac94c75f45ebdcb507d You're receiving this email because of your account on salsa.debian.org.
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