Andreas Tille pushed to branch master at Debian Blends Team / med
Commits:
5c05edc9 by Andreas Tille at 2020-05-11T22:00:16+02:00
blast is actually ncbi-blast+
- - - - -
3 changed files:
- covid-19_doc/bio_covid-19_dependencies
- covid-19_doc/bio_covid-19_dependencies_query
- covid-19_doc/bio_covid-19_dependencies_result
Changes:
=====================================
covid-19_doc/bio_covid-19_dependencies
=====================================
@@ -13,7 +13,7 @@ ascat
bcftools
bedtools
biopython
-blast
+ncbi-blast+
bowtie2
busco
bustools
=====================================
covid-19_doc/bio_covid-19_dependencies_query
=====================================
@@ -81,7 +81,7 @@ SELECT package, string_agg(architecture, ',') as
architectures FROM (
'bcftools',
'bedtools',
'biopython',
-'blast',
+'ncbi-blast+',
'bowtie2',
'busco',
'bustools',
=====================================
covid-19_doc/bio_covid-19_dependencies_result
=====================================
@@ -1,11 +1,10 @@
-Last-Update: Mon, 11 May 2020 21:48:13 +0200
+Last-Update: Mon, 11 May 2020 21:59:45 +0200
package | architectures
-----------------------------+-------------------------
abacas | all
bcftools | amd64,arm64,ppc64el
bedtools | amd64,arm64,ppc64el
- blast | amd64
bowtie2 | amd64,arm64,ppc64el
bustools | amd64
bwa | amd64,arm64,ppc64el
@@ -22,6 +21,7 @@ Last-Update: Mon, 11 May 2020 21:48:13 +0200
minimap2 | amd64,arm64,ppc64el
multiqc | all
muscle | amd64,arm64,ppc64el
+ ncbi-blast+ | amd64,arm64,ppc64el
picard | amd64,arm64,ppc64el
porechop | amd64,arm64,ppc64el
prodigal | amd64,arm64,ppc64el
View it on GitLab:
https://salsa.debian.org/blends-team/med/-/commit/5c05edc9953f2dfb1ff543e8833ddf76516320b1
--
View it on GitLab:
https://salsa.debian.org/blends-team/med/-/commit/5c05edc9953f2dfb1ff543e8833ddf76516320b1
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